tiled.adapters.hdf5.HDF5Adapter¶

class tiled.adapters.hdf5.HDF5Adapter(node, *, structure=None, metadata=None, specs=None, access_policy=None)[source]¶

Read an HDF5 file or a group within one.

This map the structure of an HDF5 file onto a “Tree” of array structures.

Examples

From the root node of a file given a filepath

>>> import h5py
>>> HDF5Adapter.from_uri("file://localhost/path/to/file.h5")

From the root node of a file given an h5py.File object

>>> import h5py
>>> file = h5py.File("path/to/file.h5")
>>> HDF5Adapter.from_file(file)

From a group within a file

>>> import h5py
>>> file = h5py.File("path/to/file.h5")
>>> HDF5Adapter(file["some_group']["some_sub_group"])

__init__(node, *, structure=None, metadata=None, specs=None, access_policy=None)[source]¶

Methods

`__init__`(node, *[, structure, metadata, ...])
`from_file`(file, *[, structure, metadata, ...])
`from_uri`(data_uri, *[, structure, metadata, ...])
`get`(k[,d])
`inlined_contents_enabled`(depth)
`items`()
`keys`()
`metadata`()
`read`([fields])
`search`(query)	Return a Tree with a subset of the mapping.
`structure`()
`values`()

Attributes